Analysis Getting Started
From SBS wiki
Contents
How to Reach the SBS Work Directory
- https://scicomp.jlab.org/docs/getting_started
- From any terminal
ssh username@login.jlab.org
-
ssh ifarm
- From any terminal
- The SBS work directory is located at
/work/halla/sbs
- Created a directory here with
mkdir username
- If you do not have permission contact Ole Hansen (ole@jlab.org) and ask to be added to the SBS user group.
- Created a directory here with
Setting up Environments
- Open
~/.cshrc
and add the lines:
source /site/12gev_phys/softenv.csh 2.5 source /work/halla/sbs/ANALYZER/install/bin/setup.csh
- This will set up the proper environments for using the analyzer
- If you want to set up your own personal analyzer you can look here https://github.com/JeffersonLab/analyzer
Setting up the SBS Replay
- If you do not plan to make changes to the replay code you can simply use the version located at
/work/halla/sbs/SBS_OFFLINE
and/work/halla/sbs/SBS_REPLAY
- The SBS analysis is located at https://github.com/JeffersonLab/SBS-offline and https://github.com/JeffersonLab/SBS-replay
- You can copy the github versions to your own work directory, if you plan to test changes to the analysis
SBS Installation
- test
Getting Files from Cache
- All raw EVIO files from GMn are on tape at
/mss/halla/sbs/raw
- Cached EVIO files are located at
/cache/halla/sbs/raw
- To write files from tape to cache see documentation here, https://scicomp.jlab.org/docs/node/586
- For example, to get all EVIO splits from run runnumber to cache execute
jcache get /mss/halla/sbs/raw/*runnumber*
- For example, to get all EVIO splits from run runnumber to cache execute
Storing Output Files
- No output files (logs or ROOT) should be stored in the work directory
- They should be stored in the "volatile" directory
- Go to
/volatile/halla/sbs
- Created a directory here with
mkdir username
- Go to